Accession
MI0001976
Description
Danio rerio
dre-mir-125b-2 precursor miRNA
Gene family
MIPF0000033;
mir-10
Literature search
25 open access papers mention dre-mir-125b-2
(191 sentences)
(191 sentences)
Sequence
11246
reads,
920
reads per million, 11 experiments
gugccccucuccuUCCCUGAGACCCUAACUUGUGAcguucugcuucgauguccaCGGGUUGGGUUCUCGGGAGCUgugagaggcac
(((((.(((...(((((.((((.((((((((((((((((.......))))).))))))))))).)))))))))....))).)))))
(((((.(((...(((((.((((.((((((((((((((((.......))))).))))))))))).)))))))))....))).)))))
Structure
c -ucc U C - cu
gugcc cuc uUCCC GAGA CCUAACUUGUG Acguu g
||||| ||| ||||| |||| ||||||||||| ||||| c
cacgg gag GAGGG CUCU GGGUUGGGCac uguag u
a ugUC - U c cu
Annotation confidence
High
Do you think this miRNA is real?
Genome context
chr5: 29998762-29998847 [+]
Clustered miRNAs
2 other miRNAs are < 10 kb from dre-mir-125b-2
| Name | Accession | Chromosome | Start | End | Strand | Confidence |
|---|
Database links
Mature dre-miR-125b-5p
| Accession | MIMAT0001821 |
| Description | Danio rerio dre-miR-125b-5p mature miRNA |
| Sequence | 14 - UCCCUGAGACCCUAACUUGUGA - 35 |
| Evidence |
experimental
cloned [1] |
| Database links |
|
| Predicted targets |
|
Mature dre-miR-125b-2-3p
| Accession | MIMAT0031964 |
| Description | Danio rerio dre-miR-125b-2-3p mature miRNA |
| Sequence | 55 - CGGGUUGGGUUCUCGGGAGCU - 75 |
| Evidence | not_experimental |
| Database links |
|
References
|
