Stem-loop dre-mir-152

Accession

MI0002017

Description

Danio rerio dre-mir-152 precursor miRNA mir-148

Gene
family

RF00248; mir-148

Literature search

4 open access papers mention dre-mir-152
(5 sentences)

Sequence

2276 reads, 172 reads per million, 11 experiments

cuguucaccuggcucaaguucugugauacacucagacuuugaaucagugguagUCAGUGCAUGACAGAACUUUGGcccgg
.......((.((((.(((((((((.((.((((..((((.............)))))))).)).))))))))).)))).))

Structure

cuguuca  u    c         g  a    ca    uugaa 
       cc ggcu aaguucugu au cacu  gacu     u
       || |||| ||||||||| || ||||  ||||     c
       gg ccGG UUCAAGACA UA GUGA  CUga     a
-------  c    U         G  C    --    uggug 

Annotation confidence High

Genome context

chr3: 24095957-24096036 [+]

Mature dre-miR-152

• Accession: MIMAT0001847
• Description: Danio rerio dre-miR-152 mature miRNA
• Sequence: 54 - UCAGUGCAUGACAGAACUUUGG - 75
• Evidence: not_experimental

References

1. PubMed ID: 15937218
   The developmental miRNA profiles of zebrafish as determined by small RNA cloning
   "Chen PY, Manninga H, Slanchev K, Chien M, Russo JJ, Ju J, Sheridan R, John B, Marks DS, Gaidatzis D, Sander C, Zavolan M, Tuschl T"
   "Genes Dev (2005) 19:1288-1293