Stem-loop mmu-mir-463

Accession

MI0002398

Symbol

MGI: Mir463

Description

Mus musculus mmu-mir-463 precursor miRNA mir-463

Gene
family

RF00934; mir-463

Literature search

7 open access papers mention mmu-mir-463
(11 sentences)

Sequence

21830 reads, 1601 reads per million, 27 experiments

cuuUACCUAAUUUGUUGUCCAUCAUguaaaacauaaaugaUGAUAGACACCAUAUAAGGUAGaggaagguucacu
((((((((.((.((.((((((((((...........))))))...)))).)).)).))))))))...........

Structure

-----------        A  U  U    ---      guaa 
           cuuUACCU AU UG UGUC   CAUCAU    a
           |||||||| || || ||||   ||||||    a
           gaGAUGGA UA AC ACAG   GUagua    c
ucacuuggaag        A  U  C    AUA      aaua 

Annotation confidence High

Genome context

chrX: 66799223-66799297 [-]

Clustered miRNAs

6 other miRNAs are < 10 kb from mmu-mir-463

Mature mmu-miR-463-5p

• Accession: MIMAT0002104
• Description: Mus musculus mmu-miR-463-5p mature miRNA
• Sequence: 4 - UACCUAAUUUGUUGUCCAUCAU - 25
• Evidence: experimental ; cloned [1-2], Illumina [3-4]

Mature mmu-miR-463-3p

• Accession: MIMAT0004758
• Description: Mus musculus mmu-miR-463-3p mature miRNA
• Sequence: 41 - UGAUAGACACCAUAUAAGGUAG - 62
• Evidence: experimental ; cloned [2], Illumina [3-4]

References

1. PubMed ID: 17604727
   A mammalian microRNA expression atlas based on small RNA library sequencing
   "Landgraf P, Rusu M, Sheridan R, Sewer A, Iovino N, Aravin A, Pfeffer S, Rice A, Kamphorst AO, Landthaler M, Lin C, Socci ND, Hermida L, Fulci V, Chiaretti S, Foa R, Schliwka J, Fuchs U, Novosel A, Muller RU, Schermer B, Bissels U, Inman J, Phan Q, Chien M"
   "Cell (2007) 129:1401-1414


2. PubMed ID: 20215419
   MicroRNA transcriptome in the newborn mouse ovaries determined by massive parallel sequencing
   "Ahn HW, Morin RD, Zhao H, Harris RA, Coarfa C, Chen ZJ, Milosavljevic A, Marra MA, Rajkovic A"
   "Mol Hum Reprod (2010) 16:463-471


3. PubMed ID: 20413612
   Mammalian microRNAs: experimental evaluation of novel and previously annotated genes
   "Chiang HR, Schoenfeld LW, Ruby JG, Auyeung VC, Spies N, Baek D, Johnston WK, Russ C, Luo S, Babiarz JE, Blelloch R, Schroth GP, Nusbaum C, Bartel DP"
   "Genes Dev (2010) 24:992-1009


4. PubMed ID: 15901636
   MicroRNA Mirn122a reduces expression of the posttranscriptionally regulated germ cell transition protein 2 (Tnp2) messenger RNA (mRNA) by mRNA cleavage
   "Yu Z, Raabe T, Hecht NB"
   "Biol Reprod (2005) 73:427-433