miRBase entry: ssc-let-7f-1

Stem-loop ssc-let-7f-1

Sus scrofa ssc-let-7f-1 precursor miRNA
Gene family
MIPF0000002; let-7

Literature search
47 open access papers mention ssc-let-7f-1
(238 sentences)


2415 reads, 1108 reads per million, 15 experiments

u      U                    ----        cau 
 guggga GAGGUAGUAGAUUGUAUAGU    Uuuagggu   a
 |||||| ||||||||||||||||||||    ||||||||    
 cacccu uucugucaucugacauauca    agguucua   c
g      -                    auag        ccc 

Annotation confidence Not enough data
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Genome context
chrX: 51801728-51801810 [-]
Clustered miRNAs
1 other miRNA is < 10 kb from ssc-let-7f-1
Name Accession Chromosome Start End Strand Confidence

Database links

Mature ssc-let-7f-5p

Accession MIMAT0002152
Description Sus scrofa ssc-let-7f-5p mature miRNA
Evidence experimental
Illumina [1-2]


  1. PubMed ID: 15885146
    Pigs in sequence space: a 0.66X coverage pig genome survey based on shotgun sequencing
    "Wernersson R, Schierup MH, Jorgensen FG, Gorodkin J, Panitz F, Staerfeldt HH, Christensen OF, Mailund T, Hornshoj H, Klein A, Wang J, Liu B, Hu S, Dong W, Li W, Wong GK, Yu J, Wang J, Bendixen C, Fredholm M, Brunak S, Yang H, Bolund L"
    "BMC Genomics (2005) 6:70

  2. PubMed ID: 20180025
    Cloning and characterization of microRNAs from porcine skeletal muscle and adipose tissue
    "Cho IS, Kim J, Seo HY, Lim DH, Hong JS, Park YH, Park DC, Hong KC, Whang KY, Lee YS"
    "Mol Biol Rep (2010) 37:3567-3574

  3. PubMed ID: 21312241
    MicroRNA identity and abundance in developing swine adipose tissue as determined by Solexa sequencing
    "Li G, Li Y, Li X, Ning X, Li M, Yang G"
    "J Cell Biochem (2011) 112:1318-1328

  4. PubMed ID: 24499489
    Exploration of microRNAs in porcine milk exosomes
    Chen T, Xi QY, Ye RS, Cheng X, Qi QE, Wang SB, Shu G, Wang LN, Zhu XT, Jiang QY, Zhang YL
    BMC Genomics (2014) 15:100