Accession
MI0002482
Description
Kaposi sarcoma-associated herpesvirus
kshv-mir-K12-4 precursor miRNA
Sequence
auaacuAGCUAAACCGCAGUACUCUAGGgcauucauuuguuacaUAGAAUACUGAGGCCUAGCUGAuuau
((((.((((((..((.(((((.((((.((((......))))...)))).))))).))..)))))).))))
((((.((((((..((.(((((.((((.((((......))))...)))).))))).))..)))))).))))
Structure
c AA G C --G uu
auaa uAGCUA CC CAGUA UCUA Ggca c
|||| |||||| || ||||| |||| ||||
uauu GUCGAU GG GUCAU AGAU uugu a
A CC A A aca uu
Annotation confidence
Low
Do you think this miRNA is real?
Comments
Samols et al. incorrectly named this sequence miR-3 [3]. Cai et al. define the likely miRNA primary transcripts in [4].
Genome context
KSU75698: 121413-121482 [-]
Clustered miRNAs
11 other miRNAs are < 10 kb from kshv-mir-K12-4
| Name | Accession | Chromosome | Start | End | Strand | Confidence |
|---|
Disease association
kshv-mir-K12-4 is associated with one or more human diseases in the Human microRNA Disease Database
| Disease | Description | Category | PubMed ID |
|---|
Database links
Mature kshv-miR-K12-4-5p
| Accession | MIMAT0002191 |
| Description | Kaposi sarcoma-associated herpesvirus kshv-miR-K12-4-5p mature miRNA |
| Sequence | 7 - AGCUAAACCGCAGUACUCUAGG - 28 |
| Evidence |
experimental
cloned [1-3,5], Illumina [6], SOLiD [7] |
Mature kshv-miR-K12-4-3p
| Accession | MIMAT0002192 |
| Description | Kaposi sarcoma-associated herpesvirus kshv-miR-K12-4-3p mature miRNA |
| Sequence | 45 - UAGAAUACUGAGGCCUAGCUGA - 66 |
| Evidence |
experimental
cloned [1-3,5], Illumina [6], SOLiD [7] |
References
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