Stem-loop ppa-mir-141

Accession

MI0002490

Description

Pan paniscus ppa-mir-141 precursor miRNA

Sequence

uggccggcccuggguccaucuuccaguacaguguuggauggucuaauugugaagcuccuAACACUGUCUGGUAAAGAUGGcccccggguggguuc
.((((.((((.(((.(((((((((((.(((((((((((...((.......))...))).))))))))))))..))))))).))).)))).)))).

Structure

u    g    u   u       --    u        -   ugg  ua 
 ggcc gccc ggg ccaucuu  ccag acaguguu gga   uc  a
 |||| |||| ||| |||||||  |||| |||||||| |||   ||  u
 uugg uggg ccc GGUAGAA  GGUC UGUCACAA ccu   ag  u
c    g    c   c       AU    -        u   cga  ug 

Annotation confidence Not enough data

Comments

Berezikov et al. used primers designed from human miRNA gene flanking sequence to amplify miRNA precursor regions in primates [1]. The expression of the mature miRNA was not validated.

Genome context

chr12: 7011606-7011700 [+]

Mature ppa-miR-141

• Accession: MIMAT0002201
• Description: Pan paniscus ppa-miR-141 mature miRNA
• Sequence: 60 - AACACUGUCUGGUAAAGAUGG - 80
• Evidence: not_experimental

References

1. PubMed ID: 15652478
   Phylogenetic shadowing and computational identification of human microRNA genes
   "Berezikov E, Guryev V, van de Belt J, Wienholds E, Plasterk RH, Cuppen E"
   "Cell (2005) 120:21-24