Accession
MI0002553
Description
Pan paniscus
ppa-mir-143 precursor miRNA
Sequence
gcgcagcgcccugucucccagccugaggugcagugcugcaucucuggucaguugggagucUGAGAUGAAGCACUGUAGCUCAggaagagagaaguuuuucugcagc
((((((.......((((.(..((((((.(((((((((.((((((.((((......)).)).)))))).))))))))).))))))..).)))).......)))).))
((((((.......((((.(..((((((.(((((((((.((((((.((((......)).)).)))))).))))))))).))))))..).)))).......)))).))
Structure
- cgcccug c ag g g u - ag gc gcag ucuc c ccugag ugcagugcu caucuc gg uc u || |||| |||| | |||||| ||||||||| |||||| || || cg cguc agag g ggACUC AUGUCACGA GUAGAG cu ag u a uuuuuga a aa G A U g gg
Annotation confidence
Low
Do you think this miRNA is real?
Comments
Berezikov et al. used primers designed from human miRNA gene flanking sequence to amplify miRNA precursor regions in primates [1]. The expression of the mature miRNA was not validated.
Genome context
chr5: 150864637-150864742 [+]
Clustered miRNAs
1 other miRNA is < 10 kb from ppa-mir-143
| Name | Accession | Chromosome | Start | End | Strand | Confidence |
|---|
Database links
Mature ppa-miR-143
| Accession | MIMAT0002261 |
| Description | Pan paniscus ppa-miR-143 mature miRNA |
| Sequence | 61 - UGAGAUGAAGCACUGUAGCUCA - 82 |
| Evidence | not_experimental |
References
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