Stem-loop mml-mir-22

Accession

MI0002631

Description

Macaca mulatta mml-mir-22 precursor miRNA mir-22

Gene
family

RF00653; mir-22

Literature search

14 open access papers mention mml-mir-22
(36 sentences)

Sequence

10864261 reads, 16785.0 reads per million, 153 experiments

ggcugagccgcaguAGUUCUUCAGUGGCAAGCUUUAUGuccugacccagcuaAAGCUGCCAGUUGAAGAACUGUugcccucugcc
(((.(((..((((((((((((((((((((.((((((.((.........))))))))))))).))))))))))))))).))).)))

Structure

   u   cc               -     A      U  ccu 
ggc gag  gcaguAGUUCUUCAG UGGCA GCUUUA Gu   g
||| |||  ||||||||||||||| ||||| |||||| ||   a
ccg cuc  cguUGUCAAGAAGUU ACCGU CGAAau cg   c
   u   -c               G     -      -  acc 

Annotation confidence High

Comments

Berezikov et al. used primers designed from human miRNA gene flanking sequence to amplify miRNA precursor regions in primates [1]. The expression of the mature miRNA was not validated.

Genome context

16: 1567952-1568036 [-]

Mature mml-miR-22-5p

• Accession: MIMAT0061158
• Description: Macaca mulatta mml-miR-22-5p mature miRNA
• Sequence: 15 - AGUUCUUCAGUGGCAAGCUUUAUG - 38
• Evidence: not_experimental

Mature mml-miR-22-3p

• Accession: MIMAT0002330
• Description: Macaca mulatta mml-miR-22-3p mature miRNA
• Sequence: 53 - AAGCUGCCAGUUGAAGAACUGU - 74
• Evidence: not_experimental

References

1. PubMed ID: 15652478
   Phylogenetic shadowing and computational identification of human microRNA genes
   "Berezikov E, Guryev V, van de Belt J, Wienholds E, Plasterk RH, Cuppen E"
   "Cell (2005) 120:21-24