Accession
MI0002714
Description
Macaca mulatta
mml-mir-100 precursor miRNA
Gene family
MIPF0000033;
mir-10
Literature search
1 open access papers mention mml-mir-100
(2 sentences)
(2 sentences)
Sequence
1001384
reads,
7559
reads per million, 9 experiments
ccuguugccacaAACCCGUAGAUCCGAACUUGUGguauuaguccgcacAAGCUUGUGUCUAUAGGUAUGugucuuuuagg
((((....((((.(((.((((((.(((.((((((...........)))))).))).)))))).))).)))).....))))
((((....((((.(((.((((((.(((.((((((...........)))))).))).)))))).))).)))).....))))
Structure
-uugc A C C A guau
ccug caca ACC GUAGAU CGA CUUGUG u
|||| |||| ||| |||||| ||| |||||| a
ggau guGU UGG UAUCUG GUU GAAcac g
uuucu A A U C gccu
Annotation confidence
High
Do you think this miRNA is real?
Comments
Berezikov et al. used primers designed from human miRNA gene flanking sequence to amplify miRNA precursor regions in primates [2]. The expression of this mature miRNA was validated by Miska et al [1].
Genome context
chr14: 115006675-115006754 [-]
Clustered miRNAs
1 other miRNA is < 10 kb from mml-mir-100
| Name | Accession | Chromosome | Start | End | Strand | Confidence |
|---|
Database links
Mature mml-miR-100-5p
| Accession | MIMAT0002422 |
| Description | Macaca mulatta mml-miR-100-5p mature miRNA |
| Sequence | 13 - AACCCGUAGAUCCGAACUUGUG - 34 |
| Evidence |
experimental
cloned [1], Illumina [3] |
| Database links |
|
| Predicted targets |
|
Mature mml-miR-100-3p
| Accession | MIMAT0026580 |
| Description | Macaca mulatta mml-miR-100-3p mature miRNA |
| Sequence | 49 - AAGCUUGUGUCUAUAGGUAUG - 69 |
| Evidence |
experimental
Illumina [3] |
References
|
