Accession
MI0002816
Description
Pongo pygmaeus
ppy-mir-182 precursor miRNA
Sequence
cacagcugcuugccuucccccguuUUUGGCAAUGGUAGAACUCACAcuggugagguaacaggauccggugguucuagacuugccaacuauggggcgaggacucagccggcac
....((((((.(((((.((((((..(((((((...((((((...((((((..............))))))))))))...)))))))..)))))).)))).)..)).))))..
....((((((.(((((.((((((..(((((((...((((((...((((((..............))))))))))))...)))))))..)))))).)))).)..)).))))..
Structure
caca - -u - c uU UGG UCA ugaggu
gcug cu g ccuu ccccgu UUGGCAA UAGAAC CAcugg a
|||| || | |||| |||||| ||||||| |||||| ||||||
cggc ga c ggag ggggua aaccguu aucuug guggcc a
--ca c cu a c uc cag --- uaggac
Annotation confidence
Not enough data
Do you think this miRNA is real?
Comments
Berezikov et al. used primers designed from human miRNA gene flanking sequence to amplify miRNA precursor regions in primates [1]. The expression of the mature miRNA was not validated.
Genome context
chr7: 126686148-126686259 [-]
Clustered miRNAs
2 other miRNAs are < 10 kb from ppy-mir-182
| Name | Accession | Chromosome | Start | End | Strand | Confidence |
|---|
Database links
Mature ppy-miR-182
| Accession | MIMAT0002514 |
| Description | Pongo pygmaeus ppy-miR-182 mature miRNA |
| Sequence | 25 - UUUGGCAAUGGUAGAACUCACA - 46 |
| Evidence | not_experimental |
References
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