miRBase entry: ggo-mir-216

Stem-loop ggo-mir-216

Accession

MI0002863

Description

Gorilla gorilla ggo-mir-216 precursor miRNA

Sequence

gauggcugugaguuggcuUAAUCUCAGCUGGCAACUGUGagauguucauacaaucccucacaguggucucugggauuaugcuaaacagagcaauuuccuagcccucacga
((.(((((.((((((((.(((((((((..(((.((((((((.(((....)))....)))))))).))).))))))))).)))))..........))).))))).))....

Structure

----  u     u   ----------     u         CU   A        ---a   u 
    ga ggcug gag          uuggc UAAUCUCAG  GGC ACUGUGag    ugu c
    || ||||| |||          ||||| |||||||||  ||| ||||||||    |||  
    cu ccgau cuu          aaucg auuaggguc  cug ugacacuc    aca a
agca  c     c   uaacgagaca     u         -u   g        ccua   u

Annotation confidence Not enough data

Do you think this miRNA is real?

Comments

Berezikov et al. used primers designed from human miRNA gene flanking sequence to amplify miRNA precursor regions in primates [1]. The expression of the mature miRNA was not validated.

Genome context

chr2A: 50995605-50995714 [+]

Clustered miRNAs

1 other miRNA is < 10 kb from ggo-mir-216

Name	Accession	Chromosome	Start	End	Strand	Confidence

Database links

Mature ggo-miR-216

Accession	MIMAT0002560
Description	Gorilla gorilla ggo-miR-216 mature miRNA
Sequence	19 - UAAUCUCAGCUGGCAACUGUG - 39
Evidence	not_experimental

References

PubMed ID: 15652478
Phylogenetic shadowing and computational identification of human microRNA genes
"Berezikov E, Guryev V, van de Belt J, Wienholds E, Plasterk RH, Cuppen E"
"Cell (2005) 120:21-24