Accession
MI0002864
Description
Pongo pygmaeus
ppy-mir-216a precursor miRNA
Sequence
gauggcugugaguuggcuUAAUCUCAGCUGGCAACUGUGagauguucauacaaucccucacaguggucucugggauuaugcuaaacagagcaauuuccuugcccucacga
......(((((((((((.(((((((((..(((.((((((((.(((....)))....)))))))).))).))))))))).))))).....((((.....)))).)))))).
......(((((((((((.(((((((((..(((.((((((((.(((....)))....)))))))).))).))))))))).))))).....((((.....)))).)))))).
Structure
gauggc ------------------- u CU A ---a u
ugugag uuggc UAAUCUCAG GGC ACUGUGag ugu c
|||||| ||||| ||||||||| ||| |||||||| |||
gcacuc aaucg auuaggguc cug ugacacuc aca a
-----a ccguuccuuuaacgagaca u -u g ccua u
Annotation confidence
Low
Do you think this miRNA is real?
Comments
Berezikov et al. used primers designed from human miRNA gene flanking sequence to amplify miRNA precursor regions in primates [1]. The expression of the mature miRNA was not validated.
Genome context
chr2A: 55022400-55022509 [+]
Clustered miRNAs
1 other miRNA is < 10 kb from ppy-mir-216a
| Name | Accession | Chromosome | Start | End | Strand | Confidence |
|---|
Database links
Mature ppy-miR-216a
| Accession | MIMAT0002561 |
| Description | Pongo pygmaeus ppy-miR-216a mature miRNA |
| Sequence | 19 - UAAUCUCAGCUGGCAACUGUG - 39 |
| Evidence | not_experimental |
References
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