Accession
MI0002894
Description
Pongo pygmaeus
ppy-mir-221 precursor miRNA
Sequence
ugaacauccaggucuggggcaugaaccuggcauacaauguagauuucuguguucguuaggcaacAGCUACAUUGUCUGCUGGGUUUCaggcuaccuggaaacauguucuc
.((((((((((((....(((.(((((((((((.(((((((((....(((((((.....))).))))))))))))).))))))).)))).))))))))))....)))))..
.((((((((((((....(((.(((((((((((.(((((((((....(((((((.....))).))))))))))))).))))))).)))).))))))))))....)))))..
Structure
-u ---- cugg a - u auuu - c gaaca uccaggu ggc ugaa ccuggca acaauguag cugu guu g ||||| ||||||| ||| |||| ||||||| ||||||||| |||| ||| u cuugu aggucca ucg aCUU GGGUCGU UGUUACAUC GAca cgg u cu acaa ---- g U C ---- a a
Annotation confidence
Low
Do you think this miRNA is real?
Comments
Berezikov et al. used primers designed from human miRNA gene flanking sequence to amplify miRNA precursor regions in primates [1]. The expression of the mature miRNA was not validated.
Genome context
chrX: 46470821-46470930 [-]
Clustered miRNAs
1 other miRNA is < 10 kb from ppy-mir-221
| Name | Accession | Chromosome | Start | End | Strand | Confidence |
|---|
Database links
Mature ppy-miR-221
| Accession | MIMAT0002585 |
| Description | Pongo pygmaeus ppy-miR-221 mature miRNA |
| Sequence | 65 - AGCUACAUUGUCUGCUGGGUUUC - 87 |
| Evidence | not_experimental |
References
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