miRBase entry: ggo-mir-215

Stem-loop ggo-mir-215

Accession

MI0003031

Description

Gorilla gorilla ggo-mir-215 precursor miRNA

Sequence

aucauucagaaaugguauacgggaaaAUGACCUAUGAAUUGACAGACaauauagcugaguuugucugucauuucuuuaggccaauauucuguaugacugugcuacuucaa
...........(((((((((((((...((.((((.(((.((((((((((...........)))))))))).)))..)))).))...)))))))).)))))..........

Structure

aucauucagaa     -        aaA  A    -U   U          uaua 
           auggu auacggga   UG CCUA  GAA UGACAGACaa    g
           ||||| ||||||||   || ||||  ||| ||||||||||    c
           uguca uaugucuu   ac ggau  cuu acugucuguu    u
-aacuucaucg     g        aua  c    uu   u          ugag

Annotation confidence Not enough data

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Comments

Berezikov et al. used primers designed from human miRNA gene flanking sequence to amplify miRNA precursor regions in primates [1]. The expression of the mature miRNA was not validated.

Genome context

chr1: 200131702-200131811 [-]

Clustered miRNAs

1 other miRNA is < 10 kb from ggo-mir-215

Name	Accession	Chromosome	Start	End	Strand	Confidence

Database links

Mature ggo-miR-215

Accession	MIMAT0002734
Description	Gorilla gorilla ggo-miR-215 mature miRNA
Sequence	27 - AUGACCUAUGAAUUGACAGAC - 47
Evidence	not_experimental

References

PubMed ID: 15652478
Phylogenetic shadowing and computational identification of human microRNA genes
"Berezikov E, Guryev V, van de Belt J, Wienholds E, Plasterk RH, Cuppen E"
"Cell (2005) 120:21-24