Stem-loop ggo-mir-27a

Accession

MI0003036

Description

Gorilla gorilla ggo-mir-27a precursor miRNA

Sequence

cugaggagcagggcuuagcugcuugugagcaggguccacaccaagucgugUUCACAGUGGCUAAGUUCCGCCccccag
(((.((.((.(((((((((((((.(((((((.((.(........))).)))))))))))))))))))).)).)).)))

Structure

   a  a  a             u       g  u cac 
cug gg gc gggcuuagcugcu gugagca gg c   a
||| || || ||||||||||||| ||||||| || |    
gac cc CG CUUGAAUCGGUGA CACUUgu cu g   c
   c  C  C             -       g  - aac 

Annotation confidence Not enough data

Comments

Berezikov et al. used primers designed from human miRNA gene flanking sequence to amplify miRNA precursor regions in primates [1]. The expression of the mature miRNA was not validated.

Genome context

chr19: 13614151-13614228 [-]

Clustered miRNAs

2 other miRNAs are < 10 kb from ggo-mir-27a

Mature ggo-miR-27a

• Accession: MIMAT0002739
• Description: Gorilla gorilla ggo-miR-27a mature miRNA
• Sequence: 51 - UUCACAGUGGCUAAGUUCCGCC - 72
• Evidence: not_experimental

References

1. PubMed ID: 15652478
   Phylogenetic shadowing and computational identification of human microRNA genes
   "Berezikov E, Guryev V, van de Belt J, Wienholds E, Plasterk RH, Cuppen E"
   "Cell (2005) 120:21-24