miRBase entry: ppa-mir-24-2

Stem-loop ppa-mir-24-2


Accession
MI0003042
Description
Pan paniscus ppa-mir-24-2 precursor miRNA


Sequence


cucugccucccgugccuacugagcugaaacacaguugguuuguguacacUGGCUCAGUUCAGCAGGAACAGgg
(((((..(((.((....(((((((((..((((((.....))))))....)))))))))...)).))).)))))

Structure
     cc   c  gccu         --aa      u 
cucug  ucc gu    acugagcug    acacag u
|||||  ||| ||    |||||||||    |||||| g
ggGAC  AGG CG    UGACUCGGU    uguguu g
     -A   A  -ACU         caca      u 


Annotation confidence Low
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Comments
Berezikov et al. used primers designed from human miRNA gene flanking sequence to amplify miRNA precursor regions in primates [1]. The expression of the mature miRNA was not validated.

Genome context
chr19: 14130330-14130402 [-]
Clustered miRNAs
2 other miRNAs are < 10 kb from ppa-mir-24-2
Name Accession Chromosome Start End Strand Confidence




Database links

Mature ppa-miR-24-3p

Accession MIMAT0002343
Description Pan paniscus ppa-miR-24-3p mature miRNA
Sequence 50 - UGGCUCAGUUCAGCAGGAACAG - 71
Evidence not_experimental

References

  1. PubMed ID: 15652478
    Phylogenetic shadowing and computational identification of human microRNA genes
    "Berezikov E, Guryev V, van de Belt J, Wienholds E, Plasterk RH, Cuppen E"
    "Cell (2005) 120:21-24