miRBase entry: hsa-mir-520e

Stem-loop hsa-mir-520e


Accession
MI0003143
Symbol
HGNC: MIR520E
Description
Homo sapiens hsa-mir-520e precursor miRNA

Literature search
40 open access papers mention hsa-mir-520e
(97 sentences)

Sequence

10 reads, 3 reads per million, 3 experiments
ucuccugcugugaccCUCAAGAUGGAAGCAGUUUCUGuugucugaaaggaaagAAAGUGCUUCCUUUUUGAGGGuuacuguuugaga
((((..((.(((((((((((((.(((((((.(((((....(((...)))..))))).))))))).))))))))))))).))..))))

Structure
    cu  u             U       G     Guug   g 
ucuc  gc gugaccCUCAAGA GGAAGCA UUUCU    ucu  
||||  || ||||||||||||| ||||||| |||||    ||| a
agag  ug cauuGGGAGUUUU CCUUCGU AAAga    gga  
    uu  u             U       G     --aa   a 


Annotation confidence Not enough data
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Genome context
chr19: 53675711-53675797 [+]
Clustered miRNAs
8 other miRNAs are < 10 kb from hsa-mir-520e
Name Accession Chromosome Start End Strand Confidence




Disease association
hsa-mir-520e is associated with one or more human diseases in the Human microRNA Disease Database
Disease Description Category PubMed ID


Database links

Mature hsa-miR-520e-3p

Accession MIMAT0002825
Description Homo sapiens hsa-miR-520e-3p mature miRNA
Sequence 54 - AAAGUGCUUCCUUUUUGAGGG - 74
Evidence experimental
array-cloned [1]

Mature hsa-miR-520e-5p

Accession MIMAT0037324
Description Homo sapiens hsa-miR-520e-5p mature miRNA
Sequence 16 - CUCAAGAUGGAAGCAGUUUCUG - 37
Evidence experimental
Illumina [2]

References

  1. PubMed ID: 15965474
    Identification of hundreds of conserved and nonconserved human microRNAs
    "Bentwich I, Avniel A, Karov Y, Aharonov R, Gilad S, Barad O, Barzilai A, Einat P, Einav U, Meiri E, Sharon E, Spector Y, Bentwich Z"
    "Nat Genet (2005) 37:766-770

  2. PubMed ID: 25822230
    Selective microRNA-Offset RNA expression in human embryonic stem cells
    Asikainen S, Heikkinen L, Juhila J, Holm F, Weltner J, Trokovic R, Mikkola M, Toivonen S, Balboa D, Lampela R, Icay K, Tuuri T, Otonkoski T, Wong G, Hovatta O
    PLoS One (2015) 10:e0116668