Stem-loop hsa-mir-520g

Accession

MI0003166

Symbol

HGNC: MIR520G

Description

Homo sapiens hsa-mir-520g precursor miRNA mir-515

Gene
family

RF00639; mir-515

Literature search

33 open access papers mention hsa-mir-520g
(94 sentences)

Sequence

61 reads, 3 reads per million, 17 experiments

ucccaugcugugacccUCUAGAGGAAGCACUUUCUGUUUguugucugagaaaaaACAAAGUGCUUCCCUUUAGAGUGUuaccguuuggga
(((((.((.(((((.(((((((((((((((((..(((((.............))))))))))))).))))))))).))))).)).)))))

Structure

     u  u     c         -        UC     guugu 
uccca gc gugac cUCUAGAGG AAGCACUU  UGUUU     c
||||| || ||||| ||||||||| ||||||||  |||||     u
agggu ug cauUG GAGAUUUCC UUCGUGAA  ACAaa     g
     u  c     U         C        --     aaaga 

Annotation confidence Low

Genome context

chr19: 53722166-53722255 [+]

Clustered miRNAs

9 other miRNAs are < 10 kb from hsa-mir-520g

Disease association

hsa-mir-520g is associated with one or more human diseases in the Human microRNA Disease Database

Mature hsa-miR-520g-3p

• Accession: MIMAT0002858
• Description: Homo sapiens hsa-miR-520g-3p mature miRNA
• Sequence: 55 - ACAAAGUGCUUCCCUUUAGAGUGU - 78
• Evidence: experimental ; array-cloned [1], cloned [2], Illumina [3]

Mature hsa-miR-520g-5p

• Accession: MIMAT0026611
• Description: Homo sapiens hsa-miR-520g-5p mature miRNA
• Sequence: 17 - UCUAGAGGAAGCACUUUCUGUUU - 39
• Evidence: experimental ; Illumina [3]

References

1. PubMed ID: 17604727
   A mammalian microRNA expression atlas based on small RNA library sequencing
   "Landgraf P, Rusu M, Sheridan R, Sewer A, Iovino N, Aravin A, Pfeffer S, Rice A, Kamphorst AO, Landthaler M, Lin C, Socci ND, Hermida L, Fulci V, Chiaretti S, Foa R, Schliwka J, Fuchs U, Novosel A, Muller RU, Schermer B, Bissels U, Inman J, Phan Q, Chien M"
   "Cell (2007) 129:1401-1414


2. PubMed ID: 15965474
   Identification of hundreds of conserved and nonconserved human microRNAs
   "Bentwich I, Avniel A, Karov Y, Aharonov R, Gilad S, Barad O, Barzilai A, Einat P, Einav U, Meiri E, Sharon E, Spector Y, Bentwich Z"
   "Nat Genet (2005) 37:766-770


3. PubMed ID: 23034410
   Birth and expression evolution of mammalian microRNA genes
   "Meunier J, Lemoine F, Soumillon M, Liechti A, Weier M, Guschanski K, Hu H, Khaitovich P, Kaessmann H"
   "Genome Res (2013) 23:34-45