Stem-loop hsa-mir-501

Accession

MI0003185

Symbol

HGNC: MIR501

Description

Homo sapiens hsa-mir-501 precursor miRNA mir-500

Gene
family

RF01903; mir-500

Literature search

35 open access papers mention hsa-mir-501
(59 sentences)

Sequence

9875 reads, 45 reads per million, 128 experiments

gcucuuccucucuAAUCCUUUGUCCCUGGGUGAGAgugcuuucugaaugcAAUGCACCCGGGCAAGGAUUCUgagagggugagc
((((.(((((((.(((((((.(.(((.(((((....(((.........)))...))))))))))))))))..))))))).))))

Structure

    u       -u       U U   U     AGAg   uuu 
gcuc uccucuc  AAUCCUU G CCC GGGUG    ugc   c
|||| |||||||  ||||||| | ||| |||||    |||   u
cgag gggagag  UUAGGAA C GGG CCCAC    Acg   g
    u       UC       - -   -     -GUA   uaa 

Annotation confidence High

Genome context

chrX: 50009722-50009805 [+]

Clustered miRNAs

7 other miRNAs are < 10 kb from hsa-mir-501

Disease association

hsa-mir-501 is associated with one or more human diseases in the Human microRNA Disease Database

Mature hsa-miR-501-5p

• Accession: MIMAT0002872
• Description: Homo sapiens hsa-miR-501-5p mature miRNA
• Sequence: 14 - AAUCCUUUGUCCCUGGGUGAGA - 35
• Evidence: experimental ; array-cloned [1], cloned [2]

Mature hsa-miR-501-3p

• Accession: MIMAT0004774
• Description: Homo sapiens hsa-miR-501-3p mature miRNA
• Sequence: 51 - AAUGCACCCGGGCAAGGAUUCU - 72
• Evidence: experimental ; cloned [2]

References

1. PubMed ID: 17604727
   A mammalian microRNA expression atlas based on small RNA library sequencing
   "Landgraf P, Rusu M, Sheridan R, Sewer A, Iovino N, Aravin A, Pfeffer S, Rice A, Kamphorst AO, Landthaler M, Lin C, Socci ND, Hermida L, Fulci V, Chiaretti S, Foa R, Schliwka J, Fuchs U, Novosel A, Muller RU, Schermer B, Bissels U, Inman J, Phan Q, Chien M"
   "Cell (2007) 129:1401-1414


2. PubMed ID: 15965474
   Identification of hundreds of conserved and nonconserved human microRNAs
   "Bentwich I, Avniel A, Karov Y, Aharonov R, Gilad S, Barad O, Barzilai A, Einat P, Einav U, Meiri E, Sharon E, Spector Y, Bentwich Z"
   "Nat Genet (2005) 37:766-770