Stem-loop tni-mir-192

Accession

MI0003258

Description

Tetraodon nigroviridis tni-mir-192 precursor miRNA

Gene family

MIPF0000063; mir-192

Sequence

cacgaggugAUGACCUAUGAAUUGACAGCCaguaacuggagccucugccugucaguucuguaggccacugcugcguccguccc
.(((.((((.((.(((((((((((((((.(((............))).)))))))))).))))).)).)))).))).......

Structure

------c   a    A  A     -          C   uaacu 
       acg ggug UG CCUAU GAAUUGACAG Cag     g
       ||| |||| || ||||| |||||||||| |||      
       ugc ucgu ac ggaug cuugacuguc guc     g
cccugcc   g    c  c     u          c   uccga 

Annotation confidence Not enough data

Comments

This Tetraodon miRNA sequence is predicted based on homology with a verified zebrafish sequence (Mihaela Zavolan, personal communication).

Genome context

7: 7655502-7655584 [+]

Clustered miRNAs

1 other miRNA is < 10 kb from tni-mir-192

Mature tni-miR-192

• Accession: MIMAT0002942
• Description: Tetraodon nigroviridis tni-miR-192 mature miRNA
• Sequence: 10 - AUGACCUAUGAAUUGACAGCC - 30
• Evidence: not_experimental

References