Accession
MI0003270
Description
Tetraodon nigroviridis
tni-mir-23b precursor miRNA
Sequence
ggcugugaggguuccuggcgugcugauuugugaccuaugauaaaAUCACAUUGCCAGGGAUUACCAcaccgcc
(((.(((.((((((((((((((.((((((.............)))))))).))))))))))..)).))).)))
(((.(((.((((((((((((((.((((((.............)))))))).))))))))))..)).))).)))
Structure
u a -- - c gugac ggc gug gg guuccuggcg ug ugauuu c ||| ||| || |||||||||| || |||||| u ccg cac CC UAGGGACCGU AC ACUAaa a c A AU U - auagu
Annotation confidence
Not enough data
Do you think this miRNA is real?
Comments
This Tetraodon miRNA sequence is predicted based on homology with a verified zebrafish sequence (Mihaela Zavolan, personal communication).
Genome context
12: 8516219-8516291 [+]
Clustered miRNAs
2 other miRNAs are < 10 kb from tni-mir-23b
| Name | Accession | Chromosome | Start | End | Strand | Confidence |
|---|
Database links
Mature tni-miR-23b
| Accession | MIMAT0002954 |
| Description | Tetraodon nigroviridis tni-miR-23b mature miRNA |
| Sequence | 45 - AUCACAUUGCCAGGGAUUACCA - 66 |
| Evidence | not_experimental |
References
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