Stem-loop tni-mir-365

Accession

MI0003284

Description

Tetraodon nigroviridis tni-mir-365 precursor miRNA

Gene family

MIPF0000061; mir-365

Sequence

cagcaagaaaagugagggacuuuuaggggcagcuguguuuuauuaacccagucaUAAUGCCCCUAAAAAUCCUUAUugcucuugcaauuguc
..((((((..((((((((..(((((((((((((((.(((.....))).)))).....))))))))))).))))))))..)))))).......

Structure

-----ca      aa        ac           -----    u   u 
       gcaaga  agugaggg  uuuuaggggca     gcug guu u
       ||||||  ||||||||  |||||||||||     |||| ||| a
       cguucu  uUAUUCCU  AAAAUCCCCGU     ugac caa u
cuguuaa      cg        -A           AAUac    c   u 

Annotation confidence Not enough data

Comments

This Tetraodon miRNA sequence is predicted based on homology with a verified zebrafish sequence (Mihaela Zavolan, personal communication).

Genome context

Un_random: 38921278-38921369 [+]

Clustered miRNAs

1 other miRNA is < 10 kb from tni-mir-365

Mature tni-miR-365

• Accession: MIMAT0002968
• Description: Tetraodon nigroviridis tni-miR-365 mature miRNA
• Sequence: 55 - UAAUGCCCCUAAAAAUCCUUAU - 76
• Evidence: not_experimental

References