miRBase entry: tni-mir-100

Stem-loop tni-mir-100


Accession
MI0003410
Description
Tetraodon nigroviridis tni-mir-100 precursor miRNA


Sequence

cacaAACCCGUAGAUCCGAACUUGUGgugacuggccgcacaagcucguaucuauagguaugug
((((.(((.((((((.(((.((((((.((......)))))))).))).)))))).))).))))

Structure
    A   C      C   A      g  ac 
caca ACC GUAGAU CGA CUUGUG ug  u
|||| ||| |||||| ||| |||||| ||   
gugu ugg uaucua gcu gaacac gc  g
    a   a      u   c      -  cg 


Annotation confidence Not enough data
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Comments
This Tetraodon miRNA sequence is predicted based on homology with a verified zebrafish sequence (Mihaela Zavolan, personal communication).

Genome context
7: 5619635-5619697 [-]
Clustered miRNAs
2 other miRNAs are < 10 kb from tni-mir-100
Name Accession Chromosome Start End Strand Confidence




Database links

Mature tni-miR-100

Accession MIMAT0003064
Description Tetraodon nigroviridis tni-miR-100 mature miRNA
Sequence 5 - AACCCGUAGAUCCGAACUUGUG - 26
Evidence not_experimental

References