Stem-loop tni-mir-219-1

Accession

MI0003412

Description

Tetraodon nigroviridis tni-mir-219-1 precursor miRNA

Gene family

MIPF0000044; mir-219

Sequence

ucugagcacuagcagcUGAUUGUCCAAACGCAAUUCUUgugaaaauccaaagccuacccgagaauugugccuggacaucuguugcuggacgcucc
...((((.((((((((.(((.(((((..(((((((((((.(................))))))))))))..)))))))).))))))))..)))).

Structure

ucu    -a        U   U     AA           u aaaaucc 
   gagc  cuagcagc GAU GUCCA  CGCAAUUCUUg g       a
   ||||  |||||||| ||| |||||  ||||||||||| |        
   cucg  ggucguug cua caggu  guguuaagagc c       a
--c    ca        u   -     cc           - cauccga 

Annotation confidence Not enough data

Comments

This Tetraodon miRNA sequence is predicted based on homology with a verified zebrafish sequence (Mihaela Zavolan, personal communication).

Genome context

12: 10155044-10155138 [-]

Mature tni-miR-219

• Accession: MIMAT0002901
• Description: Tetraodon nigroviridis tni-miR-219 mature miRNA
• Sequence: 17 - UGAUUGUCCAAACGCAAUUCUU - 38
• Evidence: not_experimental

References