Stem-loop tni-mir-183-1

Accession

MI0003454

Description

Tetraodon nigroviridis tni-mir-183-1 precursor miRNA

Literature search

1 open access papers mention tni-mir-183-1
(1 sentences)

Sequence

5 reads, 0.0 reads per million, 3 experiments

cugugUAUGGCACUGGUAGAAUUCACUGugagagcucacuaucagugaauuaccauagggccauaaacag
((((.((((((..(((((..((((((((..((......))..)))))))))))))....)))))).))))

Structure

    g      --AC     GA        ug  ag 
cugu UAUGGC    UGGUA  AUUCACUG  ag  c
|||| ||||||    |||||  ||||||||  ||   
gaca auaccg    accau  uaagugac  uc  u
    a      ggau     --        ua  ac 

Annotation confidence Not enough data

Comments

This Tetraodon miRNA sequence is predicted based on homology with a verified zebrafish sequence (Mihaela Zavolan, personal communication).

Genome context

19: 3385637-3385706 [-]

Clustered miRNAs

2 other miRNAs are < 10 kb from tni-mir-183-1

Mature tni-miR-183-5p

• Accession: MIMAT0003090
• Description: Tetraodon nigroviridis tni-miR-183-5p mature miRNA
• Sequence: 6 - UAUGGCACUGGUAGAAUUCACUG - 28
• Evidence: not_experimental

References