Stem-loop hsa-mir-570

Accession

MI0003577

Symbol

HGNC: MIR570

Description

Homo sapiens hsa-mir-570 precursor miRNA

Literature search

17 open access papers mention hsa-mir-570
(79 sentences)

Sequence

1960 reads, 14 reads per million, 70 experiments

cuagauaaguuauuaggugggugcAAAGGUAAUUGCAGUUUUUCCCauuauuuuaauugCGAAAACAGCAAUUACCUUUGCaccaaccugauggagu
.........(((((((((.(((((((((((((((((.((((((.(.((((...)))).).)))))).))))))))))))))))).)))))))))...

Structure

cuagauaag         g                 A      C C    u 
         uuauuaggu ggugcAAAGGUAAUUGC GUUUUU C auua  
         ||||||||| ||||||||||||||||| |||||| | |||| u
         gguagucca ccaCGUUUCCAUUAACG CAAAAG g uaau  
------uga         a                 A      C u    u 

Annotation confidence Not enough data

Comments

The mature sequence shown here represents the most commonly cloned form from large-scale cloning studies [2]. The 5' end of the miRNA may be offset with respect to previous annotations.

Genome context

chr3: 195699401-195699497 [+]

Disease association

hsa-mir-570 is associated with one or more human diseases in the Human microRNA Disease Database

Mature hsa-miR-570-3p

• Accession: MIMAT0003235
• Description: Homo sapiens hsa-miR-570-3p mature miRNA
• Sequence: 60 - CGAAAACAGCAAUUACCUUUGC - 81
• Evidence: experimental ; SAGE [1], cloned [2]

Mature hsa-miR-570-5p

• Accession: MIMAT0022707
• Description: Homo sapiens hsa-miR-570-5p mature miRNA
• Sequence: 25 - AAAGGUAAUUGCAGUUUUUCCC - 46
• Evidence: not_experimental

References

1. PubMed ID: 17604727
   A mammalian microRNA expression atlas based on small RNA library sequencing
   "Landgraf P, Rusu M, Sheridan R, Sewer A, Iovino N, Aravin A, Pfeffer S, Rice A, Kamphorst AO, Landthaler M, Lin C, Socci ND, Hermida L, Fulci V, Chiaretti S, Foa R, Schliwka J, Fuchs U, Novosel A, Muller RU, Schermer B, Bissels U, Inman J, Phan Q, Chien M"
   "Cell (2007) 129:1401-1414


2. PubMed ID: 16505370
   The colorectal microRNAome
   "Cummins JM, He Y, Leary RJ, Pagliarini R, Diaz LA Jr, Sjoblom T, Barad O, Bentwich Z, Szafranska AE, Labourier E, Raymond CK, Roberts BS, Juhl H, Kinzler KW, Vogelstein B, Velculescu VE"
   "Proc Natl Acad Sci U S A (2006) 103:3687-3692