Stem-loop hsa-mir-597

Accession

MI0003609

Symbol

HGNC: MIR597

Description

Homo sapiens hsa-mir-597 precursor miRNA mir-597

Gene
family

RF00973; mir-597

Literature search

4 open access papers mention hsa-mir-597
(8 sentences)

Sequence

325 reads, 27 reads per million, 56 experiments

uacuuacucuacgugUGUGUCACUCGAUGACCACUGUgaagacaguaaaauguacagUGGUUCUCUUGUGGCUCAAGCGUaauguagaguacugguc
.(((((((((((((.((((((((..((.(((((((((....(((......)))))))))))).))..)))))....)))..))))))))))..))).

Structure

u   --          -g   ----     UC  U         gaag   gu 
 acu  uacucuacgu  UGU    GUCAC  GA GACCACUGU    aca  a
 |||  ||||||||||  |||    |||||  || |||||||||    |||   
 ugg  augagaugua  GCG    CGGUG  CU UUGGUgaca    ugu  a
c   uc          aU   AACU     UU  C         ----   aa 

Annotation confidence High

Genome context

chr8: 9741672-9741768 [+]

Disease association

hsa-mir-597 is associated with one or more human diseases in the Human microRNA Disease Database

Mature hsa-miR-597-5p

• Accession: MIMAT0003265
• Description: Homo sapiens hsa-miR-597-5p mature miRNA
• Sequence: 16 - UGUGUCACUCGAUGACCACUGU - 37
• Evidence: experimental ; SAGE [1], cloned [2], Illumina [3]

Mature hsa-miR-597-3p

• Accession: MIMAT0026619
• Description: Homo sapiens hsa-miR-597-3p mature miRNA
• Sequence: 58 - UGGUUCUCUUGUGGCUCAAGCGU - 80
• Evidence: experimental ; Illumina [3]

References

1. PubMed ID: 17604727
   A mammalian microRNA expression atlas based on small RNA library sequencing
   "Landgraf P, Rusu M, Sheridan R, Sewer A, Iovino N, Aravin A, Pfeffer S, Rice A, Kamphorst AO, Landthaler M, Lin C, Socci ND, Hermida L, Fulci V, Chiaretti S, Foa R, Schliwka J, Fuchs U, Novosel A, Muller RU, Schermer B, Bissels U, Inman J, Phan Q, Chien M"
   "Cell (2007) 129:1401-1414


2. PubMed ID: 16505370
   The colorectal microRNAome
   "Cummins JM, He Y, Leary RJ, Pagliarini R, Diaz LA Jr, Sjoblom T, Barad O, Bentwich Z, Szafranska AE, Labourier E, Raymond CK, Roberts BS, Juhl H, Kinzler KW, Vogelstein B, Velculescu VE"
   "Proc Natl Acad Sci U S A (2006) 103:3687-3692


3. PubMed ID: 23034410
   Birth and expression evolution of mammalian microRNA genes
   "Meunier J, Lemoine F, Soumillon M, Liechti A, Weier M, Guschanski K, Hu H, Khaitovich P, Kaessmann H"
   "Genome Res (2013) 23:34-45