Stem-loop hsa-mir-598

Accession

MI0003610

Symbol

HGNC: MIR598

Description

Homo sapiens hsa-mir-598 precursor miRNA mir-598

Gene
family

RF01059; mir-598

Literature search

14 open access papers mention hsa-mir-598
(27 sentences)

Sequence

190575 reads, 199 reads per million, 106 experiments

gcuugaugaugcugcugaugcugGCGGUGAUCCCGAUGGUGUGAGCuggaaauggggugcUACGUCAUCGUUGUCAUCGUCAucaucaucauccgag
.((((((((......(((((.((((((((((..((((((((((.(((........)))..))))))))))..)))))))))).))))))))).))))

Structure

g    -    ugcugc     c          CC          -A   gga 
 cuug auga      ugaug ugGCGGUGAU  CGAUGGUGUG  GCu   a
 |||| ||||      ||||| ||||||||||  ||||||||||  |||    
 gagc uacu      acuac ACUGCUACUG  GCUACUGCAU  ugg   a
-    c    ------     u          UU          cg   ggu 

Annotation confidence High

Genome context

chr8: 11035206-11035302 [-]

Disease association

hsa-mir-598 is associated with one or more human diseases in the Human microRNA Disease Database

Mature hsa-miR-598-3p

• Accession: MIMAT0003266
• Description: Homo sapiens hsa-miR-598-3p mature miRNA
• Sequence: 61 - UACGUCAUCGUUGUCAUCGUCA - 82
• Evidence: experimental ; Microarray [1], SAGE [1], cloned [2], Illumina [3]

Mature hsa-miR-598-5p

• Accession: MIMAT0026620
• Description: Homo sapiens hsa-miR-598-5p mature miRNA
• Sequence: 24 - GCGGUGAUCCCGAUGGUGUGAGC - 46
• Evidence: experimental ; Illumina [3]

References

1. PubMed ID: 17604727
   A mammalian microRNA expression atlas based on small RNA library sequencing
   "Landgraf P, Rusu M, Sheridan R, Sewer A, Iovino N, Aravin A, Pfeffer S, Rice A, Kamphorst AO, Landthaler M, Lin C, Socci ND, Hermida L, Fulci V, Chiaretti S, Foa R, Schliwka J, Fuchs U, Novosel A, Muller RU, Schermer B, Bissels U, Inman J, Phan Q, Chien M"
   "Cell (2007) 129:1401-1414


2. PubMed ID: 16505370
   The colorectal microRNAome
   "Cummins JM, He Y, Leary RJ, Pagliarini R, Diaz LA Jr, Sjoblom T, Barad O, Bentwich Z, Szafranska AE, Labourier E, Raymond CK, Roberts BS, Juhl H, Kinzler KW, Vogelstein B, Velculescu VE"
   "Proc Natl Acad Sci U S A (2006) 103:3687-3692


3. PubMed ID: 23034410
   Birth and expression evolution of mammalian microRNA genes
   "Meunier J, Lemoine F, Soumillon M, Liechti A, Weier M, Guschanski K, Hu H, Khaitovich P, Kaessmann H"
   "Genome Res (2013) 23:34-45