Accession
MI0003735
Description
Epstein Barr virus
ebv-mir-BART13 precursor miRNA
Sequence
uugggcaccucgauAACCGGCUCGUGGCUCGUACAGacgauuguuuggcucUGUAACUUGCCAGGGACGGCUGAcgauguguuuag
.(((((((.(((.((.(((.(((.((((...(((((((.(.....).).))))))....))))))).))).)).))).))))))).
.(((((((.(((.((.(((.(((.((((...(((((((.(.....).).))))))....))))))).))).)).))).))))))).
Structure
u c a A G G -UCG - g u ugggcac ucg uA CCG CUC UGGC UACAGa c a u ||||||| ||| || ||| ||| |||| |||||| | | g auuugug agc GU GGC GGG ACCG AUGUcu g u u g u A C A - UUCA c g u
Annotation confidence
Low
Do you think this miRNA is real?
Comments
mir-BART13 was discovered independently by two groups. Cai et al mapped the ends of the mature sequence by cloning [1]. Grundhoff et al confirmed that the 3' arm gives rise to a mature miRNA product, but didnot experimentally determine the extents of that product [2]. This sequence is misnamed miR-BART19 in [2].
Genome context
HHV507799: 148512-148597 [+]
Clustered miRNAs
21 other miRNAs are < 10 kb from ebv-mir-BART13
| Name | Accession | Chromosome | Start | End | Strand | Confidence |
|---|
Disease association
ebv-mir-BART13 is associated with one or more human diseases in the Human microRNA Disease Database
| Disease | Description | Category | PubMed ID |
|---|
Database links
Mature ebv-miR-BART13-5p
| Accession | MIMAT0004818 |
| Description | Epstein Barr virus ebv-miR-BART13-5p mature miRNA |
| Sequence | 15 - AACCGGCUCGUGGCUCGUACAG - 36 |
| Evidence |
experimental
cloned [3] |
Mature ebv-miR-BART13-3p
| Accession | MIMAT0003424 |
| Description | Epstein Barr virus ebv-miR-BART13-3p mature miRNA |
| Sequence | 52 - UGUAACUUGCCAGGGACGGCUGA - 74 |
| Evidence |
experimental
cloned [1,3], array [2], Northern [2] |
References
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