Accession
MI0004718
Description
Physcomitrella patens
ppt-MIR1219a precursor miRNA
Sequence
ugaaguguggacgauggagagucagccuCUUCCUGCCUCUCACUAGCUUcaucccuuccucccuaaauuuuagucugggagggaaggagcuauugguggucaggaauagcgcacccuucauuuauccacacuuca
(((((((((((.(((((((.((..((((.((((((((.(.((.(((((((.((((((((...((((...))))...)))))))).))))))).))).)).)))))).)).)))).)))))))..)))))))))))
(((((((((((.(((((((.((..((((.((((((((.(.((.(((((((.((((((((...((((...))))...)))))))).))))))).))).)).)))))).)).)))).)))))))..)))))))))))
Structure
-c a ca - C - U U C a ucc a
ugaagugugga gauggag gu gc cu UUCCUG CC C CA UAGCUUc ucccuucc cuaa
||||||||||| ||||||| || || || |||||| || | || ||||||| |||||||| |||| u
acuucacaccu uuacuuc ca cg ga aaggac gg g gu aucgagg agggaggg gauu
au c -- c u u u - u a ucu u
Annotation confidence
Not enough data
Do you think this miRNA is real?
Genome context
Chr04: 10210326-10210460 [-]
Clustered miRNAs
1 other miRNA is < 10 kb from ppt-MIR1219a
| Name | Accession | Chromosome | Start | End | Strand | Confidence |
|---|
Database links
Mature ppt-miR1219a
| Accession | MIMAT0003908 |
| Description | Physcomitrella patens ppt-miR1219a mature miRNA |
| Sequence | 29 - CUUCCUGCCUCUCACUAGCUU - 49 |
| Evidence |
experimental
Northern [1], 454 [2] |
References
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