miRBase entry: xtr-mir-30c-1

Stem-loop xtr-mir-30c-1

Accession
MI0004815
Description
Xenopus tropicalis xtr-mir-30c-1 precursor miRNA
Sequence

accaugcagcagugauUGUAAACAUCCUACACUCUCAGCugugaacauaagguggcugggagaaggguguuuacucccccugccaugga
.(((((..((((.....(((((((((((...(((((((((.............))))))))).))))))))))).....))))))))).
Structure
a     ca    ugauU           ACA         gugaa 
 ccaug  gcag     GUAAACAUCCU   CUCUCAGCu     c
 |||||  ||||     |||||||||||   |||||||||     a
 gguac  cguc     cauuuguggga   gagggucgg     u
a     --    ccccu           --a         uggaa
Annotation confidence Not enough data
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Genome context
chr2: 83742896-83742984 [+]
Clustered miRNAs
1 other miRNA is < 10 kb from xtr-mir-30c-1
Name Accession Chromosome Start End Strand Confidence



Database links

Mature xtr-miR-30c

Accession MIMAT0003577
Description Xenopus tropicalis xtr-miR-30c mature miRNA
Sequence 17 - UGUAAACAUCCUACACUCUCAGC - 39
Evidence not_experimental

References
Comments or questions? Email mirbase@manchester.ac.uk