Stem-loop bta-mir-125b-2

Accession

MI0005457

Description

Bos taurus bta-mir-125b-2 precursor miRNA

Gene family

MIPF0000033; mir-10

Literature search

35 open access papers mention bta-mir-125b-2
(119 sentences)

Sequence

111778 reads, 1232 reads per million, 77 experiments

gacuuuuccuagUCCCUGAGACCCUAACUUGUGAgguauuuuaguagcaucacaagucaggcucuugggaccuaggcggagggga
..((((.(((((((((.((((.(((.(((((((((.(((....))).).)))))))).))).)))))))).))))).))))....

Structure

--ga    u     -    U    C   A        - g   u 
    cuuu ccuag UCCC GAGA CCU ACUUGUGA g uau u
    |||| ||||| |||| |||| ||| |||||||| | |||  
    gagg ggauc aggg uucu gga ugaacacu c aug u
aggg    c     c    -    c   c        a g   a 

Annotation confidence High

Genome context

chr1: 19935732-19935816 [-]

Mature bta-miR-125b

• Accession: MIMAT0003539
• Description: Bos taurus bta-miR-125b mature miRNA
• Sequence: 13 - UCCCUGAGACCCUAACUUGUGA - 34
• Evidence: experimental ; cloned [1-2]

References

1. PubMed ID: 17306260
   Identification and characterization of microRNAs from the bovine adipose tissue and mammary gland
   "Gu Z, Eleswarapu S, Jiang H"
   "FEBS Lett (2007) 581:981-988


2. PubMed ID: 19267191
   Identification and characteristics of cattle microRNAs by homology searching and small RNA cloning
   "Long JE, Chen HX"
   "Biochem Genet (2009) 47:329-343