miRBase entry: bta-mir-15a

Stem-loop bta-mir-15a


Accession
MI0005458
Description
Bos taurus bta-mir-15a precursor miRNA mir-15
Gene
family?
RF00455; mir-15

Literature search
17 open access papers mention bta-mir-15a
(31 sentences)

Sequence

20653 reads, 355 reads per million, 74 experiments
ccuuggaguaaagUAGCAGCACAUAAUGGUUUGUggauuuugaaaaggugcaggccauauugugcugccucaaaaauacaagg
(((((.......(..((((((((..((((((((((.............))))))))))..))))))))..).......)))))

Structure
     gaguaaa UA        UA          gauuu 
ccuug       g  GCAGCACA  AUGGUUUGUg     u
|||||       |  ||||||||  ||||||||||     g
ggaac       c  cgucgugu  uaccggacgu     a
     auaaaaa uc        ua          ggaaa 


Annotation confidence Not enough data
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Genome context
chr12: 19660532-19660614 [-]
Clustered miRNAs
1 other miRNA is < 10 kb from bta-mir-15a
Name Accession Chromosome Start End Strand Confidence




Database links

Mature bta-miR-15a

Accession MIMAT0004334
Description Bos taurus bta-miR-15a mature miRNA
Sequence 14 - UAGCAGCACAUAAUGGUUUGU - 34
Evidence experimental
cloned [1]

References

  1. PubMed ID: 17306260
    Identification and characterization of microRNAs from the bovine adipose tissue and mammary gland
    "Gu Z, Eleswarapu S, Jiang H"
    "FEBS Lett (2007) 581:981-988