Stem-loop mtr-MIR156d

Accession

MI0005585

Description

Medicago truncatula mtr-MIR156d precursor miRNA

Literature search

10 open access papers mention mtr-MIR156d
(77 sentences)

Sequence

gaaauUGACAGAAGAGAGUGAGCACauagacacucgguauagauguauaucguugccuuugcgUGCUCACUCAUCUUUCUGUCAAAuucc
(((.(((((((((((((((((((((.((((..(.(((((((....)))))))..)..)))).)))))))))).)).))))))))).))).

Structure

-   a         -  -          a    ca -u       g 
 gaa uUGACAGAA GA GAGUGAGCAC uaga  c  cgguaua a
 ||| ||||||||| || |||||||||| ||||  |  |||||||  
 cuu AACUGUCUU CU CUCACUCGUg guuu  g  gcuauau u
c   A         U  A          c    cc uu       g 

Annotation confidence Low

Genome context

chr3: 37487558-37487647 [-]

Mature mtr-miR156d-5p

• Accession: MIMAT0011071
• Description: Medicago truncatula mtr-miR156d-5p mature miRNA
• Sequence: 6 - UGACAGAAGAGAGUGAGCAC - 25
• Evidence: experimental ; Illumina [2]

Mature mtr-miR156d-3p

• Accession: MIMAT0026725
• Description: Medicago truncatula mtr-miR156d-3p mature miRNA
• Sequence: 64 - UGCUCACUCAUCUUUCUGUCAAA - 86
• Evidence: experimental ; Illumina [2]

References

1. 
   "Bonnet E"
   (2007) None:


2. PubMed ID: 23572382
   microRNA profiling of root tissues and root forming explant cultures in Medicago truncatula
   "Eyles RP, Williams PH, Ohms SJ, Weiller GF, Ogilvie HA, Djordjevic MA, Imin N"
   "Planta (2013) 238:91-105