Stem-loop dme-mir-1008

Accession

MI0005869

Description

Drosophila melanogaster dme-mir-1008 precursor miRNA

Literature search

1 open access papers mention dme-mir-1008
(4 sentences)

Sequence

5488 reads, 167 reads per million, 47 experiments

GUAAAUAUCUAAAGUUGAACUuggccaauggcaagUCACAGCUUUUUGUGUUUACAg
((((((((..(((((((.(((((.((...)))))))..)))))))..))))))))..

Structure

--        CU       -A     g  a 
  GUAAAUAU  AAAGUUG  ACUug cc  
  ||||||||  |||||||  ||||| || a
  CAUUUGUG  UUUCGAC  Ugaac gg  
gA        UU       AC     -  u 

Annotation confidence Medium

Genome context

chr2R: 10885533-10885589 [+]

Mature dme-miR-1008-3p

• Accession: MIMAT0005021
• Description: Drosophila melanogaster dme-miR-1008-3p mature miRNA
• Sequence: 36 - UCACAGCUUUUUGUGUUUACA - 56
• Evidence: experimental ; 454 [1]

Mature dme-miR-1008-5p

• Accession: MIMAT0032028
• Description: Drosophila melanogaster dme-miR-1008-5p mature miRNA
• Sequence: 1 - GUAAAUAUCUAAAGUUGAACU - 21
• Evidence: not_experimental

References

1. PubMed ID: 17589500
   Intronic microRNA precursors that bypass Drosha processing
   "Ruby JG, Jan CH, Bartel DP"
   "Nature (2007) 448:83-86