Stem-loop dme-mir-1009

Accession

MI0005870

Description

Drosophila melanogaster dme-mir-1009 precursor miRNA

Literature search

2 open access papers mention dme-mir-1009
(2 sentences)

Sequence

1865 reads, 26 reads per million, 48 experiments

guaaguguaagacuuucuugaguuacccgcgaugaguaUCUCAAAAAUUGUUACAUUUCAG
(.((((((((.(.(((.(((((.(((.(.....).))).)))))))).).)))))))))..

Structure

-- u        g c   c     u   c g 
  g aaguguaa a uuu uugag uac c c
  | |||||||| | ||| ||||| ||| | g
  C UUUACAUU U AAA AACUC aug g a
GA -        G U   -     U   a u 

Annotation confidence Low

Genome context

chr2R: 23993054-23993114 [-]

Mature dme-miR-1009-3p

• Accession: MIMAT0005022
• Description: Drosophila melanogaster dme-miR-1009-3p mature miRNA
• Sequence: 39 - UCUCAAAAAUUGUUACAUUUCAG - 61
• Evidence: experimental ; 454 [1]

References

1. PubMed ID: 17589500
   Intronic microRNA precursors that bypass Drosha processing
   "Ruby JG, Jan CH, Bartel DP"
   "Nature (2007) 448:83-86