Stem-loop cel-mir-1018

Accession

MI0005879

Description

Caenorhabditis elegans cel-mir-1018 precursor miRNA

Literature search

1 open access papers mention cel-mir-1018
(1 sentences)

Sequence

2286 reads, 15 reads per million, 15 experiments

guaaguucaugauuucucccauauauuuuucaugAGAGAGAUCAUUGGACUUACAG
((((((((((((((((((.(((.........))).))))))))).)))))))))..

Structure

--         -         c   aua 
  guaaguuca ugauuucuc cau   u
  ||||||||| ||||||||| |||   u
  CAUUCAGGU ACUAGAGAG gua   u
GA         U         A   cuu 

Annotation confidence Low

Genome context

chrX: 1879458-1879513 [+]

Clustered miRNAs

10 other miRNAs are < 10 kb from cel-mir-1018

Mature cel-miR-1018

• Accession: MIMAT0005031
• Description: Caenorhabditis elegans cel-miR-1018 mature miRNA
• Sequence: 35 - AGAGAGAUCAUUGGACUUACAG - 56
• Evidence: experimental ; 454 [1], Illumina [2]

References

1. PubMed ID: 19460142
   Dynamic expression of small non-coding RNAs, including novel microRNAs and piRNAs/21U-RNAs, during Caenorhabditis elegans development
   Kato M, de Lencastre A, Pincus Z, Slack FJ
   Genome Biol (2009) 10:R54


2. PubMed ID: 17589500
   Intronic microRNA precursors that bypass Drosha processing
   "Ruby JG, Jan CH, Bartel DP"
   "Nature (2007) 448:83-86