Stem-loop smo-MIR159

Accession

MI0006050

Description

Selaginella moellendorffii smo-MIR159 precursor miRNA

Sequence

uugcagggggagcucccuucaauucaacugaggucggugcgucgcuguuacucgcugcugacucaugcauucgccugacaugcccgcaaccaucaucagaucgugaucaggacacgccgaaaacaugcccgugaucaccuccgcaacucucugaucucggcgagguugaucacagaaucccccgaguuugaggcauggcagccgugugcaugaugcaggagcaggugcggcuucggcucugaacuuccCUUGGAUUGAAGGGAGCUCCCuuccagauuc
.....((((((((((((((((((((((..((((((((.((...(((((..((.(((.(((..((((((((.((.(((.((((((((.(((..((....((((((((((((....((((((............(((((..............)))))))))))...)))))))).).)))....))))))).)))))).))).)).))))))))..))).)))))..)))))....)).))).)))))..))))))))))))))))))))))........

Structure

---uugca                      cu     -   u  -guc     ua  c   g   ac        u  c   a      -  c   ca  auca   - -        gaca      aaacaugcccgu     ccuccg 
        gggggagcucccuucaauucaa  gaggu cgg gc    gcugu  cu gcu cug  ucaugcau cg cug caugcc cg aac  uc    gau c gugaucag    cgccga            gauca      c
        ||||||||||||||||||||||  ||||| ||| ||    |||||  || ||| |||  |||||||| || ||| |||||| || |||  ||    ||| | ||||||||    ||||||            |||||       
        uuCCCUCGAGGGAAGUUAGGUU  cuuca guc cg    cggcg  ga cga gac  aguacgug gc gac guacgg gu uug  ag    cua g cacuaguu    gcggcu            cuagu      a
cuuagacc                      Cc     a   u  gcuu     ug  -   g   gu        u  c   g      a  -   --  cccc   a a        -gga      ------------     cucuca 

Annotation confidence Not enough data

Genome context

Unknown

Mature smo-miR159

• Accession: MIMAT0005217
• Description: Selaginella moellendorffii smo-miR159 mature miRNA
• Sequence: 249 - CUUGGAUUGAAGGGAGCUCCC - 269
• Evidence: experimental ; 454 [1]

References

1. PubMed ID: 17601824
   Common functions for diverse small RNAs of land plants
   "Axtell MJ, Snyder JA, Bartel DP"
   "Plant Cell (2007) 19:1750-1769