Stem-loop mmu-mir-582

Accession

MI0006127

Symbol

MGI: Mir582

Description

Mus musculus mmu-mir-582 precursor miRNA mir-582

Gene
family

RF00927; mir-582

Literature search

9 open access papers mention mmu-mir-582
(38 sentences)

Sequence

12761 reads, 140 reads per million, 82 experiments

acucuuuggAUACAGUUGUUCAACCAGUUACuaaucuaacuaauugUAACCUGUUGAACAACUGAACccaaagggugcaaa
(((((((((...((((((((((((..(((((..............)))))..))))))))))))...))))))))).....

Structure

-----         AUA            CA     uaaucu 
     acucuuugg   CAGUUGUUCAAC  GUUAC      a
     |||||||||   ||||||||||||  |||||       
     ugggaaacc   GUCAACAAGUUG  CAAUg      a
aaacg         CAA            UC     uuaauc 

Annotation confidence High

Genome context

chr13: 109324744-109324824 [+]

Mature mmu-miR-582-5p

• Accession: MIMAT0005291
• Description: Mus musculus mmu-miR-582-5p mature miRNA
• Sequence: 10 - AUACAGUUGUUCAACCAGUUAC - 31
• Evidence: experimental ; cloned [1], Illumina [2-3]

Mature mmu-miR-582-3p

• Accession: MIMAT0005292
• Description: Mus musculus mmu-miR-582-3p mature miRNA
• Sequence: 47 - UAACCUGUUGAACAACUGAAC - 67
• Evidence: experimental ; cloned [1], Illumina [2-3]

References

1. PubMed ID: 17604727
   A mammalian microRNA expression atlas based on small RNA library sequencing
   "Landgraf P, Rusu M, Sheridan R, Sewer A, Iovino N, Aravin A, Pfeffer S, Rice A, Kamphorst AO, Landthaler M, Lin C, Socci ND, Hermida L, Fulci V, Chiaretti S, Foa R, Schliwka J, Fuchs U, Novosel A, Muller RU, Schermer B, Bissels U, Inman J, Phan Q, Chien M"
   "Cell (2007) 129:1401-1414


2. PubMed ID: 20215419
   MicroRNA transcriptome in the newborn mouse ovaries determined by massive parallel sequencing
   "Ahn HW, Morin RD, Zhao H, Harris RA, Coarfa C, Chen ZJ, Milosavljevic A, Marra MA, Rajkovic A"
   "Mol Hum Reprod (2010) 16:463-471


3. PubMed ID: 20413612
   Mammalian microRNAs: experimental evaluation of novel and previously annotated genes
   "Chiang HR, Schoenfeld LW, Ruby JG, Auyeung VC, Spies N, Baek D, Johnston WK, Russ C, Luo S, Babiarz JE, Blelloch R, Schroth GP, Nusbaum C, Bartel DP"
   "Genes Dev (2010) 24:992-1009