Stem-loop ddi-mir-1176

Accession

MI0006244

Description

Dictyostelium discoideum ddi-mir-1176 precursor miRNA

Literature search

1 open access papers mention ddi-mir-1176
(21 sentences)

Sequence

cccaaagucguaucagguggCCAAUUUUUAUCAAGGAAAGCuguaucaucaagugccucccucugucucuugaugauucagccuuccuugacaaaaauugcccaccugauacgacuggga
((((..((((((((((((((.((((((((.((((((((.((((.(((((((((.(.(.......).).))))))))).)))).)))))))).)))))))).)))))))))))))))))).

Structure

-    aa              C        A        A    u         u c uc 
 ccca  gucguaucaggugg CAAUUUUU UCAAGGAA GCug aucaucaag g c  c
 ||||  |||||||||||||| |||||||| |||||||| |||| ||||||||| | |  c
 gggu  cagcauaguccacc guuaaaaa aguuccuu cgac uaguaguuc c g  u
a    --              c        c        c    u         u u uc 

Annotation confidence Not enough data

Genome context

DDB0232432: 172121-172240 [+]

Mature ddi-miR-1176

• Accession: MIMAT0005531
• Description: Dictyostelium discoideum ddi-miR-1176 mature miRNA
• Sequence: 21 - CCAAUUUUUAUCAAGGAAAGC - 41
• Evidence: experimental ; cloned [1]

References

1. PubMed ID: 17916577
   The small RNA repertoire of Dictyostelium discoideum and its regulation by components of the RNAi pathway
   "Hinas A, Reimegard J, Wagner EG, Nellen W, Ambros VR, Soderbom F"
   "Nucleic Acids Res (2007) 35:6714-6726