Stem-loop hsa-mir-548i-1

Accession

MI0006421

Symbol

HGNC: MIR548I1

Description

Homo sapiens hsa-mir-548i-1 precursor miRNA

Gene family

MIPF0000317; mir-548

Literature search

42 open access papers mention hsa-mir-548i-1
(145 sentences)

Sequence

269 reads, 100 reads per million, 59 experiments

cagauggcucugaaguuugcacccuauuagguuggugcAAAAGUAAUUGCGGAUUUUGCCauuaaaaguaauggcaaaaauagcaauuauuuuuguaccagccuaguaucuuuucuccuucuaccaaacuuugucccugagccaucuca
.((((((((((((((((((.....((((((((((((((((((((((((((...(((((((((((....)))))))))))...))))))))))))))))))))))))))................))))))))).....)))))))))..

Structure

-c         -----         -----------caccc                          GGA           a 
  agauggcuc     ugaaguuug                uauuagguuggugcAAAAGUAAUUGC   UUUUGCCauua a
  |||||||||     |||||||||                ||||||||||||||||||||||||||   |||||||||||  
  ucuaccgag     guuucaaac                augauccgaccauguuuuuauuaacg   aaaacgguaau a
ac         ucccu         caucuuccucuuuucu                          aua           g 

Annotation confidence Not enough data

Genome context

chr3: 125790404-125790552 [-]

Disease association

hsa-mir-548i-1 is associated with one or more human diseases in the Human microRNA Disease Database

Mature hsa-miR-548i

• Accession: MIMAT0005935
• Description: Homo sapiens hsa-miR-548i mature miRNA
• Sequence: 39 - AAAAGUAAUUGCGGAUUUUGCC - 60
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 18285502
   Application of massively parallel sequencing to microRNA profiling and discovery in human embryonic stem cells
   "Morin RD, O'Connor MD, Griffith M, Kuchenbauer F, Delaney A, Prabhu AL, Zhao Y, McDonald H, Zeng T, Hirst M, Eaves CJ, Marra MA"
   "Genome Res (2008) 18:610-621