Accession
MI0007230
Description
Glycine max
gma-MIR1517 precursor miRNA
Literature search
2 open access papers mention gma-MIR1517
(3 sentences)
(3 sentences)
Sequence
8160
reads,
26.0
reads per million, 176 experiments
gcuagguauuuuugaccgacauuagacaugacuauuuuuagucgacauugacuaaguuuuuacagucgacauccacuagaguuuuuucgaucgacaucggucaaagcaauuuuuuagccaacaucaaucaaggcuauuuuauagccGAUGUUGGGUAGGGUUUUUUauucgacaucagucagggcuauuuuuuagccaacuucgacuagagauuuuucagccaacauugacuaaugauguuuuucagucgacaucggguagguucuauuggucggcaucgaccaagcuauuuuuuagucgauacuagauagauuuuuuugucaacgccugcuaggauuuuuuagguugacguuggcuaaaaauAGUCUUGGUCAAUGUCGUUCGAAAaaacccuagu
((((((..(((((((.(((((((.(((..(((((((((((((.((..((((((..((....))))))))..)).))))))(((((...(((((....)))))))))).....((((((((((.((((((..((((((...))))))(((((((((((((....)))))))))))))......(((((.....)))))....((((((.((((....(((...............)))....)))))))))).(((.(((((((....(((((((....)))))))((((.....))))........((((((....))))))...)))))))..)))......)))))).)))))))))))))))))...)))))))))).)))))))...))))))
((((((..(((((((.(((((((.(((..(((((((((((((.((..((((((..((....))))))))..)).))))))(((((...(((((....)))))))))).....((((((((((.((((((..((((((...))))))(((((((((((((....)))))))))))))......(((((.....)))))....((((((.((((....(((...............)))....)))))))))).(((.(((((((....(((((((....)))))))((((.....))))........((((((....))))))...)))))))..)))......)))))).)))))))))))))))))...)))))))))).)))))))...))))))
Structure
-ua c a -au uuuagucgacauugacuaaguuuuuacagucgacauccacuagaguuuuuucgaucgacaucggucaaagcaauuu a ------------------------------------------------------------------------------------------------------------------------------------------------------aaggcuauuuuauagcc G
gcuagg uuuuuga cgacauu gac gacuauu uuuagccaac ucaauc GAUGUUGGGUAGG U
|||||| ||||||| ||||||| ||| ||||||| |||||||||| |||||| |||||||||||||
ugaucc aAAAGCU GCUGUAA CUG CUGAuaa aaaucgguug aguugg cuacagcuuaUUU U
caa U - GUU ---------------------------------------------------------------------------- c auuuuuuaggaucguccgcaacuguuuuuuuagauagaucauagcugauuuuuuaucgaaccagcuacggcugguuaucuuggaugggcuacagcugacuuuuuguaguaaucaguuacaaccgacuuuuuagagaucagcuucaaccgauuuuuuaucgggacuga U
Annotation confidence
Low
Do you think this miRNA is real?
Genome context
chr14: 43676665-43677061 [+]
Database links
Mature gma-miR1517-5p
| Accession | MIMAT0054029 |
| Description | Glycine max gma-miR1517-5p mature miRNA |
| Sequence | 147 - GAUGUUGGGUAGGGUUUUUU - 166 |
| Evidence |
experimental
unknown |
Mature gma-miR1517-3p
| Accession | MIMAT0007376 |
| Description | Glycine max gma-miR1517-3p mature miRNA |
| Sequence | 364 - AGUCUUGGUCAAUGUCGUUCGAAA - 387 |
| Evidence |
experimental
454 [1] |
References
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