miRBase entry: gma-MIR1519

Dead hairpin entry

Stem-loop gma-MIR1519


Accession
MI0007232
Description
Glycine max gma-MIR1519 precursor miRNA
Comment
The pattern of deep sequencing reads mapping to this locus does not support its annotation as a microRNA.


Sequence

38088 reads, 103.0 reads per million, 176 experiments
uaucuuuacaUAAGUGUUGCAAAAUAGUCAUUccguuaaauuuuaaaguaacaccguuagugagaucaauuuuagugccacgugaacuauccaauauagcacuaaaggaugacgugacaugacauguggacgugucuccuaaaagaugucacgucauuuugaaaguccacgagacauuucacaaccuUUGCAAUGCAUGGACACUUUAAGCacgauuucugacaucuuuuaaguuagagacuauuuugcaauacuuaugcaaaagau
.((((((.(((((((((((((((((((((....(((.....((((((((..(((.....)))........((((((((....((.......)).....))))))))((((((((((((((((((((....)))))).........))))))))))))))((((((((.....))).)))))...((..(((...))).))..)))))))).)))...((((((.........)))))))))))))))))))))))))))..))))))

Structure
u      -a                     --------------------AUUc   uaaau        aacaccguuagugagaucaauuuuagugccacgugaacuauccaauauagcacuaaaggaugacgugacaugacauguggacgugucuccuaaaagaugucacgucauuuugaaaguccacgagacauuucacaa  uU   A 
 aucuuu  caUAAGUGUUGCAAAAUAGUC                        cgu     uuuaaagu                                                                                                                                       cc  UGC  
 ||||||  |||||||||||||||||||||                        |||     ||||||||                                                                                                                                       ||  ||| A
 uagaaa  guauucauaacguuuuaucag                        gca     GAAUUUCA                                                                                                                                       GG  ACG  
-      ac                     agauugaauuuucuacagucuuua   ----C        -------------------------------------------------------------------------------------------------------------------------------------CA  -U   U