Stem-loop gga-mir-1655

Accession

MI0007388

Description

Gallus gallus gga-mir-1655 precursor miRNA

Sequence

2600 reads, 2.0 reads per million, 181 experiments

ggggaaacguguuucaacacugugUCAGCUGGUCUUGGGUAAAUGCUauuguuccugcaguaUUUACCCAUGGUGGGCUGAUACagugcuggagcacagccuc
((((....((((((((.(((((((((((((.(((.((((((((((((...((....)))))))))))))).))).))))))))))))).))))))))..))))

Structure

    aaac        a             G   U            auu  u 
gggg    guguuuca cacugugUCAGCU GUC UGGGUAAAUGCU   gu c
||||    |||||||| ||||||||||||| ||| ||||||||||||   ||  
cucc    cacgaggu gugaCAUAGUCGG UGG ACCCAUUUauga   cg c
    --ga        c             G   U            ---  u 

Annotation confidence High

Genome context

8: 7496563-7496665 [+]

Mature gga-miR-1655-5p

• Accession: MIMAT0007534
• Description: Gallus gallus gga-miR-1655-5p mature miRNA
• Sequence: 25 - UCAGCUGGUCUUGGGUAAAUGCU - 47
• Evidence: experimental ; Illumina [1-2]

Mature gga-miR-1655-3p

• Accession: MIMAT0026777
• Description: Gallus gallus gga-miR-1655-3p mature miRNA
• Sequence: 63 - UUUACCCAUGGUGGGCUGAUAC - 84
• Evidence: experimental ; Illumina [2]

References

1. PubMed ID: 18469162
   A microRNA catalog of the developing chicken embryo identified by a deep sequencing approach
   "Glazov EA, Cottee PA, Barris WC, Moore RJ, Dalrymple BP, Tizard ML"
   "Genome Res (2008) 18:957-964


2. PubMed ID: 23034410
   Birth and expression evolution of mammalian microRNA genes
   "Meunier J, Lemoine F, Soumillon M, Liechti A, Weier M, Guschanski K, Hu H, Khaitovich P, Kaessmann H"
   "Genome Res (2013) 23:34-45