Stem-loop gga-mir-1667

Accession

MI0007401

Description

Gallus gallus gga-mir-1667 precursor miRNA

Sequence

194 reads, 5 reads per million, 3 experiments

gccaggagguuguaaGAGAUUCUGACACAAUGUUUAGAgauugagacagaaucUAACAUGAUGUCAGGAUUUCCCagaaccugcugc
..(((.(((((.(..((((((((((((..(((((...(((((.......))))))))))..))))))))))))..).))))).))).

Structure

gc   g     g aa            CA     UAG     ga 
  cag agguu u  GAGAUUCUGACA  AUGUU   Agauu  g
  ||| ||||| |  ||||||||||||  |||||   |||||  a
  guc uccaa a  CUUUAGGACUGU  UACAA   Ucuaa  c
-c   g     g CC            AG     ---     ga 

Annotation confidence Not enough data

Genome context

chr24: 5291926-5292012 [-]

Mature gga-miR-1667-3p

• Accession: MIMAT0007550
• Description: Gallus gallus gga-miR-1667-3p mature miRNA
• Sequence: 54 - UAACAUGAUGUCAGGAUUUCCC - 75
• Evidence: experimental ; Illumina [1-2]

Mature gga-miR-1667-5p

• Accession: MIMAT0026778
• Description: Gallus gallus gga-miR-1667-5p mature miRNA
• Sequence: 16 - GAGAUUCUGACACAAUGUUUAGA - 38
• Evidence: experimental ; Illumina [2]

References

1. PubMed ID: 18469162
   A microRNA catalog of the developing chicken embryo identified by a deep sequencing approach
   "Glazov EA, Cottee PA, Barris WC, Moore RJ, Dalrymple BP, Tizard ML"
   "Genome Res (2008) 18:957-964


2. PubMed ID: 23034410
   Birth and expression evolution of mammalian microRNA genes
   "Meunier J, Lemoine F, Soumillon M, Liechti A, Weier M, Guschanski K, Hu H, Khaitovich P, Kaessmann H"
   "Genome Res (2013) 23:34-45