Stem-loop mml-mir-10b

Accession

MI0007588

Description

Macaca mulatta mml-mir-10b precursor miRNA

Literature search

2 open access papers mention mml-mir-10b
(4 sentences)

Sequence

2407464 reads, 25697 reads per million, 9 experiments

ccagagguuguaacguugucuauauaUACCCUGUAGAACCGAAUUUGUGugguauccauauagucacAGAUUCGAUUCUAGGGGAAUAuauggucgaugcaaaaacuuca
...((((((....(((((.((((((((.((((.(((((.((((((((((.(.(((....))).))))))))))).))))))))).)))))))).)))))....)))))).

Structure

cca      guaa     u        A    G     C          u g   c 
   gagguu    cguug cuauauaU CCCU UAGAA CGAAUUUGUG g uau c
   ||||||    ||||| |||||||| |||| ||||| |||||||||| | |||  
   cuucaa    guagc gguauAUA GGGG AUCUU GCUUAGAcac u aua a
--a      aaac     u        A    -     A          - g   u 

Annotation confidence Not enough data

Genome context

chr12: 63173247-63173356 [+]

Clustered miRNAs

1 other miRNA is < 10 kb from mml-mir-10b

Mature mml-miR-10b-5p

• Accession: MIMAT0006162
• Description: Macaca mulatta mml-miR-10b-5p mature miRNA
• Sequence: 27 - UACCCUGUAGAACCGAAUUUGUG - 49
• Evidence: experimental ; Illumina [2]

Mature mml-miR-10b-3p

• Accession: MIMAT0026798
• Description: Macaca mulatta mml-miR-10b-3p mature miRNA
• Sequence: 68 - AGAUUCGAUUCUAGGGGAAUA - 88
• Evidence: experimental ; Illumina [2]

References

1. PubMed ID: 18186931
   Identification of novel homologous microRNA genes in the rhesus macaque genome
   Yue J, Sheng Y, Orwig KE
   BMC Genomics (2008) 9:8


2. PubMed ID: 23034410
   Birth and expression evolution of mammalian microRNA genes
   "Meunier J, Lemoine F, Soumillon M, Liechti A, Weier M, Guschanski K, Hu H, Khaitovich P, Kaessmann H"
   "Genome Res (2013) 23:34-45