Stem-loop mml-mir-518c

Accession

MI0007791

Description

Macaca mulatta mml-mir-518c precursor miRNA

Sequence

86 reads, 15 reads per million, 3 experiments

gcgagaagauuucaugcugugacucucUAGAGGGAAGCGCUUUCUGUUgucugaaagaaaaCAAAGCGCUUCUCUUUAGAGAGUuacgguuugagaaaagc
.........(((((.(((((((((((((((((((((((((((..((((.(((...))).))))))))))))))))))))))))))))))).))))).....

Structure

gcgagaaga     u                           UC    g   g 
         uuuca gcugugacucucUAGAGGGAAGCGCUU  UGUU ucu  
         ||||| |||||||||||||||||||||||||||  |||| ||| a
         agagu uggcauUGAGAGAUUUCUCUUCGCGAA  ACaa aga  
----cgaaa     u                           --    a   a 

Annotation confidence Medium

Genome context

chr19: 49056071-49056171 [+]

Clustered miRNAs

5 other miRNAs are < 10 kb from mml-mir-518c

Mature mml-miR-518c-3p

• Accession: MIMAT0006380
• Description: Macaca mulatta mml-miR-518c-3p mature miRNA
• Sequence: 62 - CAAAGCGCUUCUCUUUAGAGAGU - 84
• Evidence: experimental ; Illumina [2]

Mature mml-miR-518c-5p

• Accession: MIMAT0026894
• Description: Macaca mulatta mml-miR-518c-5p mature miRNA
• Sequence: 28 - UAGAGGGAAGCGCUUUCUGUU - 48
• Evidence: experimental ; Illumina [2]

References

1. PubMed ID: 18186931
   Identification of novel homologous microRNA genes in the rhesus macaque genome
   Yue J, Sheng Y, Orwig KE
   BMC Genomics (2008) 9:8


2. PubMed ID: 23034410
   Birth and expression evolution of mammalian microRNA genes
   "Meunier J, Lemoine F, Soumillon M, Liechti A, Weier M, Guschanski K, Hu H, Khaitovich P, Kaessmann H"
   "Genome Res (2013) 23:34-45