miRBase entry: mml-mir-548b

Stem-loop mml-mir-548b


Accession
MI0007820
Description
Macaca mulatta mml-mir-548b precursor miRNA

Literature search
1 open access papers mention mml-mir-548b
(2 sentences)

Sequence

1401 reads, 3.0 reads per million, 113 experiments
caggcuauguauuuagguuggugcaaaaguaauuggggcuugggccuuuauuuucaauggCAAAAACCUCAAUUGCUUUUGUgccaaccuaauacuu
........(((((.((((((((((((((((((((((((.((..(((............)))..)).)))))))))))))))))))))))))))))..

Structure
caggcuau     u                        c  gg   uuuau 
        guauu agguuggugcaaaaguaauugggg uu  gcc     u
        ||||| |||||||||||||||||||||||| ||  |||      
        cauaa uccaaccgUGUUUUCGUUAACUCC AA  Cgg     u
------uu     -                        A  AA   uaacu 


Annotation confidence Not enough data
Do you think this miRNA is real?

Genome context
4: 22578907-22579003 [-]

Database links

Mature mml-miR-548b-3p

Accession MIMAT0006411
Description Macaca mulatta mml-miR-548b-3p mature miRNA
Sequence 61 - CAAAAACCUCAAUUGCUUUUGU - 82
Evidence not_experimental

References

  1. PubMed ID: 18186931
    Identification of novel homologous microRNA genes in the rhesus macaque genome
    Yue J, Sheng Y, Orwig KE
    BMC Genomics (2008) 9:8