miRBase entry: cfa-mir-125b-2

Stem-loop cfa-mir-125b-2


Accession
MI0008077
Description
Canis familiaris cfa-mir-125b-2 precursor miRNA
Gene family
MIPF0000033; mir-10


Sequence

UCCCUGAGACCCUAACUUGUGAgguauuuuaguaacaucacaagucaggcucuugggaccu
..(((((((.(((.((((((((.((.........)).)))))))).))).)))))))....

Structure
--UC       C   A        g  auu 
    CCUGAGA CCU ACUUGUGA gu   u
    ||||||| ||| |||||||| ||   u
    ggguucu gga ugaacacu ca   a
ucca       c   c        a  aug 


Annotation confidence Not enough data
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Genome context
chr31: 13304980-13305040 [+]

Database links

Mature cfa-miR-125b

Accession MIMAT0006670
Description Canis familiaris cfa-miR-125b mature miRNA
Sequence 1 - UCCCUGAGACCCUAACUUGUGA - 22
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 18392026
    Discovering microRNAs from deep sequencing data using miRDeep
    "Friedlander MR, Chen W, Adamidi C, Maaskola J, Einspanier R, Knespel S, Rajewsky N"
    "Nat Biotechnol (2008) 26:407-415