miRBase entry: cfa-mir-10a

Stem-loop cfa-mir-10a


Accession
MI0008161
Description
Canis familiaris cfa-mir-10a precursor miRNA


Sequence

UACCCUGUAGAUCCGAAUUUGUguaaggaauuuuguggucacaaauucguaucuaggggaaua
...(((.(((((.((((((((((................)))))))))).))))).)))....

Structure
-UAC   G     C          uaaggaa 
    CCU UAGAU CGAAUUUGUg       u
    ||| ||||| ||||||||||        
    ggg aucua gcuuaaacac       u
auaa   g     u          ugguguu 


Annotation confidence Not enough data
Do you think this miRNA is real?

Genome context
chr9: 24842171-24842233 [-]

Database links

Mature cfa-miR-10a

Accession MIMAT0006737
Description Canis familiaris cfa-miR-10a mature miRNA
Sequence 1 - UACCCUGUAGAUCCGAAUUUGU - 22
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 18392026
    Discovering microRNAs from deep sequencing data using miRDeep
    "Friedlander MR, Chen W, Adamidi C, Maaskola J, Einspanier R, Knespel S, Rajewsky N"
    "Nat Biotechnol (2008) 26:407-415